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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Paul Anastas | 15th | David Thonn | Tied for 18th | 16th |
| First Basemen | Ryan DeVries | 1st | Tied for 18th | 9th | |
| Second Basemen | Nick Hall | 15th | Tied for 20th | 23rd | |
| Third Basemen | Tied for 21st | Tied for 21st | 24th | ||
| Shortstops | Orlando Pena | 1st | Tied for 21st | 21st | |
| Left Fielders | Jason Stewart | 4th | Tied for 19th | 12th | |
| Center Fielders | Rico Munguia | 1st | Tied for 23rd | 22nd | |
| Right Fielders | Leo Cazarez | 4th | Tied for 19th | 13th | |
| Starting Pitchers | Alejandro Escontrias | 2nd | Agustin Campoy | 21st | 13th |
| Relievers | Justin Brown | 20th | Jon Schmidt | 17th | 21st |
| Closers | Eric Springer | 21st | Chris Hammell | Tied for 3rd | 6th |
