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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Russ Acquisto | 18th | Steve D'Amato | 14th | 12th |
| First Basemen | Jose Cruz | 13th | Israel Navarrete | 13th | 13th |
| Second Basemen | Chris Messner | 6th | Jerry Jimenez | 9th | 7th |
| Third Basemen | Bobby Frausto | 10th | Andres Ochoa | 19th | 17th |
| Shortstops | Jared Owens | 20th | Andres Bolanos | Tied for 14th | 16th |
| Left Fielders | Chris Ryan | 2nd | Bob Newson | 6th | 1st |
| Center Fielders | Jon Macias | 14th | Chad Wiley | 17th | 12th |
| Right Fielders | Tied for 17th | Travis Pruitt | 17th | 23rd | |
| Starting Pitchers | Randy Wood | 3rd | Alberto Roman | 15th | 1st |
| Relievers | Quim Holland | 8th | Jorge Vasquez | 7th | 5th |
| Closers | Sincere Pace | 7th | Matt Koehler | 10th | 10th |
